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From the Department of Anatomy, University of Wisconsin Medical School, Madison, WI.
| Abstract |
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METHODS. Expression of E2F family members and target genes was analyzed in the lenses of nontransgenic, E2F1-null,
AE7;E2F1-sufficient; and
AE7;E2F1-null mice by in situ hybridization, Northern blot analysis, and RT-PCR.
RESULTS. In lenses of E2F1-null mice, there was no change in the expression of E2F-2 to -5 or their target genes, compared with E2F1-sufficient mice. However, in the lens of
AE7 mice where pRB proteins are inactivated, expression of E2F2 and -3a was increased. The E2F3a increase, but not that of E2F2, was dependent on E2F1. Expression of E2F target genes was increased with expression of E7 and expression of one of these, p19ARF, was E2F1 dependent.
CONCLUSIONS. Although in the normal lens there do not appear to be unique roles for E2F1 that cannot be fulfilled by other E2F family members, in the absence of functional pRB proteins, E2F1 is specifically responsible for the increased expression of E2F3a and p19ARF. These findings suggest that E2F1 may be the preferred E2F regulating these target genes in the normal lens.
| Introduction |
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Many studies have shown that the tumor-suppressor protein pRB is required for cell cycle withdrawal and differentiation of lens epithelial cells into fiber cells. Mutational inactivation of Rb leads to a failure of cells to withdraw from the cell cycle and differentiate; ultimately, they undergo apoptosis.3
Similarly, expression of the E7 oncoprotein from human papillomavirus (HPV)-16, which binds to and inactivates pRB proteins in lens cells at the time they normally differentiate, using the mouse
A-crystallin promoter, results in a similar phenotype.5
Expression in the fiber cells of the truncated form of the simian virus (SV)40 T antigen, which also binds pRB but not p53, leads to similar consequences.4
Collectively, these studies demonstrate the importance of pRB and possibly pRB family members in regulating cell cycle withdrawal during fiber cell differentiation.
pRB and the other family members, p107 and p130, when in their hypophosphorylated, active state, are capable of binding members of the E2F family of transcription factors. The pRB-E2F complex (along with the E2F binding partner, DP)6 acts as a transcriptional repressor of some target genes, such B-myb and cdc2.7 8 As the cell progresses through G1, pRB becomes hyperphosphorylated and dissociates from E2F, allowing the E2F-DP dimer to act as a transcriptional activator. E2Fs have been shown to activate many genes essential for progression into the S phase, as well as a variety of other cell-cycle control factors, including cyclins and other E2F family members.6
The E2F family of transcription factors is made up of six members that are defined by their similar DNA-binding domains. E2F1 to -5 also contain a transactivation domain and a pocket protein binding domain that allow them to interact with pRB, p107, or p1306 ; only E2F6 does not contain these domains.9 10 All E2Fs share similar dimerization domains that allow them to heterodimerize with either DP-1 or DP-2, which is thought to be necessary for efficient DNA binding.6 Although all E2F-DP dimers recognize similar DNA sequences, evidence suggests that not all E2Fs are capable of regulating all target genes. Specifically, E2F1, -2, and -3 activate target genes that are capable of inducing proliferation, whereas E2F4 and -5 do not possess this activity.11
Given the known role of pRB and pRB family members as negative regulators of E2Fs activity and the essential role of pRB in lens fiber cell differentiation, it is likely that E2Fs represent important targets of pRB regulation in lens cell growth and differentiation. In the lens, E2F1 to -5 are expressed in the epithelium, whereas only E2F1, -3, and -5 are expressed in fiber cells.12 Therefore, E2F1, -3, and -5 may play a role in fiber cell differentiation. However, the absence of reported phenotypes in germline mutations in E2F1, -3, or -513 14 suggest that these factors are dispensable for normal lens differentiation or that the absence of any one E2F in the fiber cells can be compensated for adequately by the other family members. Moreover, when pRB is inactivated, either through germline mutation or by expression of E7, the resultant proliferation and apoptosis in the fiber cell compartment can be partially rescued by either an E2F1-null mutation15 16 17 or an E2F3-null mutation18 supporting evidence for at least some roles for E2F1 and -3 that cannot be completely fulfilled by other E2F family members. Together, this evidence suggests that in the normal lens, where family members probably compensate for the loss of any particular member, it is difficult to separate the roles of individual E2Fs, whereas in the situation in which pRB function is disrupted and E2F activities are presumably increased, the unique roles of the individual E2Fs may be apparent.
In this study, we sought to determine whether compensation for the loss of E2F1 could be accounted for by increased expression of other E2Fs. In addition, we sought to determine whether any unique role for E2F1 could be discerned in the absence of functional pRB protein. To this end, we used the
AE7 mouse as a model for pRB inactivation in the lens, because germline mutation of Rb leads to embryonic lethality early in lens development. Through a series of experiments to examine E2F and E2F target gene RNA levels in the lenses from control, E2F1-null,
AE7, and
AE7;E2F1-null mice, we show that loss of E2F1 alone did not significantly alter the levels of expression in the lens of either other E2Fs or that of their target genes. In our study, expression of E7 led to increased expression of E2F2 and -3a, as well as increased expression of all target genes examined. Finally, although the E7-induced increases in expression of most of the genes examined was only partially E2F1 dependent, the E7-induced increases in expression of p19ARF and E2F3a were entirely E2F1 dependent. Thus, E2F1 mediates effects resulting from the loss of pocket protein function by uniquely regulating the expression of a subset of E2F target genes, suggesting that there may be E2F1-dependent targets in the normal lens.
| Materials and Methods |
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Reverse Transcription-Polymerase Chain Reaction
RNA was prepared from lenses dissected from a liter of neonatal mice, by using extraction reagent (TRIzol; Life Technologies, GibcoBRL, Grand Island, NY) according to the manufacturers directions, and stored at -80°C. RNA was quantified spectrophotometrically. RT-PCR was performed with first-strand synthesis beads (Ready-to-Go You Prime First Strand Synthesis Beads; Amersham Pharmacia Biotech, Piscataway, NJ) with the following primers: E2F2, as previously described12
; E2F3a: 5'-CCC GCC CTG GAG CAG TA-3'; 5'-CCC AGT TCC AGC CTT CG-3'; E2F3b: 5'-GGC TGC TTT CGG AAA TGC-3', 5'-TTT CAC AAC TAT AAC AGT TT-3'; and
C crystallin, as previously described.19
Reaction products were electrophoresed in a 1% agarose gel in 1x TAE buffer (.04 M Tris, 1 mM EDTA, adjusted to pH 7.57.8 with acetic acid), transferred to nylon membranes (GeneScreen; NEN Life Science Products, Inc., Boston, MA), and hybridized.
Northern and Southern Blot Analysis
RNA was prepared as for RT-PCR. Polyadenylated RNA was prepared from 20 µg total lens RNA from neonatal mice of the indicated genotypes, using a kit (Oligotex mRNA Mini Kit; Qiagen, Hilden, Germany), electrophoresed in a 1% agarose, 0.66-M formaldehyde gel in 1x 3-(N-morpholino)propanesulfonic acid (MOPS), and transferred to nylon membranes (GeneScreen Plus; NEN Life Science Products, Inc.) according to the manufacturers instructions. Hybridization and washes were performed according to the instructions. Random primed labeled probes were made with a kit (Random Primed DNA Labeling Kit; Roche Molecular Biochemicals, Mannheim, Germany) from restriction-digested fragments purified with a DNA purification system (Prep-a-Gene; Bio-Rad, Richmond, CA). End-labeled probes were made with T4 polynucleotide kinase (Promega, Madison, WI). Expression levels were quantitated by a phosphorescence imager (PhosphorImager; Molecular Dynamics, Sunnyvale, CA) and analyzed on computer (ImageQuant; Molecular Dynamics, and Excel; Microsoft, Redmond, WA).
Generation of Probes
To generate probes, the following primer sets were used to amplify the indicated gene from mouse genomic DNA and were cloned into a vector (P-gemT; Promega) Plasmids were then sequenced. E2F2 and E2F5: as has been described12
; E2F3a: 5'-ATG AGA AAG GGA ATC CAG C-3'; 5'-TCC TGG TGC TGG TGG CTG-3'; E2F3b: 5'-CTC CCC CGG AGC CAG GCT GCT TTC GGA AAT GCC CTT ACA GCA GCA GCA G-3', p19ARF: 5'-GAG TAC AGC AGC GGG AGC ATG G-3'; 5'-GGA TTC CGG TGC GGC CCT CTT-3'. The E2F4 probe was derived from plasmid mE2F4-3' (provided by Rene Bernards, The Netherlands Cancer Institute, Amsterdam, The Netherlands). Probes for hGAPDH, hCyclin A2, B-myb, and cdc-2 were derived from plasmids pBSGAPDH, hCylA, mB-myb, and mCdc2 (provided by Peggy J. Farnham, University of Wisconsin, Madison, WI). The hCylA AvaII fragment was subcloned into the EcoRV site of pBS to isolate regions with high homology to the mouse sequence. The probe for N-myc was derived from the plasmid pMN1.1 (provided by Ronald A. DePinho, Dana Farber Cancer Institute, Boston, MA). The probe for p53 was derived from plasmid p53 3/2, as previously described.19
In Situ Hybridization
In situ hybridizations were performed as described previously.21
E2F2 sense and antisense probes were synthesized using T7 or SP6, respectively, from the plasmid just described, with a kit (MAXIscript; Ambion, Austin, TX) to generate [
-35S] uridine triphosphate (UTP)-labeled riboprobes. DP-1 sense and antisense probes were similarly synthesized with T7 and T3, respectively, from the plasmid pBSmDP-1 (provided by Peggy J. Farnham). N-myc sense and antisense probes were similarly synthesized using T3 and T7, respectively, from the described plasmid. Hybridized sections were exposed to emulsion (NTB-2; Eastman Kodak, Rochester, NY) in the dark for 2 to 3 weeks before developing. After they were developed, the sections were counterstained with hematoxylin, mounted, and viewed under both light-field and dark-field illumination.
| Results |
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C crystallin were also amplified by RT-PCR and hybridized with specific probes by Southern blot. As expected, E2F2 transcripts were found exclusively in the epithelium, whereas
C crystallin transcripts were found only in the fiber cells (Fig. 1C)
. Based on these data, we conclude that both E2F3 isoforms are expressed in the epithelial and fiber cell compartments of the mouse lens.
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AE7 mice compared with lenses of nontransgenic mice. In situ hybridization for E2F2 confirmed these results (Fig. 3) . The expression levels of E2F3b, -4, and -5 were not affected by expression of E7.
It has been shown that loss of E2F1 provides a partial rescue of the proliferative and apoptotic defects in lenses of
AE7 mice.16
However, significant levels of inappropriate proliferation and apoptosis remain in the lenses of
AE7;E2F1-null mice. Possible mediators of the remaining proliferation and apoptosis are the other E2F family members, particularly E2F2 and -3a, because they show increased expression in the
AE7 lens and are known to be capable of inducing proliferation. Both E2F2 and -3a have E2F-binding sites in their promoters.22
23
Therefore, it is conceivable that their deregulated expression in the lens of
AE7 mice is dependent on E2F1. To explore this possibility, we compared the expression of the E2F family members in lenses of
AE7;E2F1-sufficient mice and
AE7;E2F1-null mice. Northern blot analysis with a probe specific for E2F3a showed that the increased expression level of E2F3a in the
AE7 lens was reversed by loss of E2F1 (Fig. 2)
. In contrast, in situ hybridization for E2F2 demonstrated that E2F2 showed similar levels of increased expression in the lenses of
AE7 and
AE7;E2F1-null mice (Fig. 3) . As in the lenses of
AE7 mice, levels of E2F3b, -4 and -5 in the
AE7;E2F1-null lens were not significantly altered compared with their levels in lenses of nontransgenic mice (Fig. 2)
. These data demonstrate that expression of only a subset of E2Fs shows increased expression in the presence of E7, with the expression of one of these, E2F3a, being entirely dependent on E2F1.
Expression of the E2F-Binding Partner DP-1
The finding that expression of E7 in the lens leads to increased expression of some E2F family members, suggests that there is also increased E2F activity in the lenses of
AE7 mice. However, this model assumes that expression of E2Fs necessarily corresponds to E2F activity. The transcription-regulatory activity of the E2Fs depends on their ability to bind DNA. Heterodimerization with either DP-1 or DP-2 is required for E2Fs to bind DNA efficiently.24
Consequently, sufficient levels of a DP family member must be present in the same regions of the lens as the E2Fs for there to be any E2F activity. Therefore, we examined expression of DP-1 to determine whether there is the possibility of increased E2F activity in lenses expressing E7. We chose to examine the expression of DP-1, because it is capable of heterodimerizing with E2F1 to -5, unlike DP-2, which is not thought to heterodimerize with E2F5.
We examined expression of DP-1 by in situ hybridization. In lenses from nontransgenic mice, DP-1 transcripts were found in the epithelium and the fiber cells of the transition zone. In the lenses of
AE7 mice, the expression pattern of DP-1 was expanded to include the entire fiber cell compartment (Fig. 4) . We also examined the expression of DP-1 in the lenses of E2F1-null mice and
AE7;E2F1-null mice. As expected, the expression pattern of DP-1 was not changed with the loss of E2F1. These data indicate that in lenses of both
AE7;E2F1-sufficient and
AE7;E2F1-null mice, there is DP-1 expression, suggesting that E2F activity could be found throughout the fiber cell compartment.
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AE7 Lens in the Presence and Absence of E2F1
AE7 mice with the expression levels in lenses of nontransgenic mice. Expression levels of cdc2, B-myb, cyclin A2, p19ARF, N-myc, and p53 were assessed in lenses of nontransgenic and
AE7 mice by Northern blot analysis (Fig. 5)
and quantified by phosphorescence imager. Expression levels of cdc2, B-myb, cyclin A2, p19ARF, and p53 were increased in the presence of E7. This result is consistent with the model of increased E2F activity in the
AE7 lens. The expression levels of N-myc were not significantly altered with the expression of E7, according to Northern blot analysis. However, in situ hybridization showed that the N-myc pattern was clearly expanded throughout the fiber cell compartment rather than restricted to the epithelium and transition zone (Fig. 6)
.
Because it has been shown that E2F1 can mediate some of the E7-induced proliferation and apoptosis, it is possible that expression of E2F targets are at least partially dependent on E2F1. To test this possibility, we compared expression levels of E2F target genes in lenses expressing E7 on both the E2F1-sufficient and deficient backgrounds by Northern blot analysis (Fig. 5)
and quantified the results by phosphorescence imager (Fig. 7)
. Expression levels of cdc2, B-myb, cyclin A2, and p53 were lower in the lenses of
AE7;E2F1-null mice than in the lenses of
AE7;E2F1-sufficient mice. However, the expression levels of these genes in lenses of
AE7;E2F1-null mice was still higher than their levels in lenses of nontransgenic mice. For p53, these results were verified by in situ hybridization (data not shown). The increased expression of p19ARF in lenses of
AE7 mice was completely reversed in lenses of
AE7;E2F1-null mice. By in situ hybridization, the expression pattern of N-myc in lenses of
AE7;E2F1-null mice was not altered, compared with the expression pattern in lenses of
AE7;E2F1-sufficient mice (Fig. 6)
. Thus, the effect of E2F1 on E7-induced changes in E2F target gene expression differed among the target genes examined. For some target genes (cdc2, B-myb, cyclin A2, and p53) the increased expression levels were partially dependent on E2F1; for others the change in expression was either entirely independent of E2F1 (N-myc) or entirely dependent on E2F1 (p19ARF).
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| Discussion |
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Expression of E2F3 Isoforms in the Lens
In this study, E2F3a and -3b were expressed in both the epithelium and fiber cells of the lens. It is interesting that E2F3a was expressed in both the fiber cells and the epithelium, because E2F1 was also expressed in both compartments. It is known that E2F3a has activities similar to those of E2F1.11
Therefore, E2F3a is a good candidate to provide compensatory E2F activity in the E2F1-null lens. Because E2F3b has only recently been described, little is known about its activity. However, given the knowledge that expression of E2F3b is not cell-cycle regulated,22
it is tempting to speculate that it performs its major role in cells that are not actively cycling, which in the lens would include cells in the central epithelium, transition zone, and fiber cell compartments. Further work determining the spatial distribution of E2F3a and -3b, as well as their relative expression levels in the two compartments of the lens, may provide some additional clues.
Compensation for the Loss of E2F1
E2F1, -3, and -5 are all expressed in the fiber cells in the developing rat lens.12
However, there are no reported lens defects in mice with germline mutations in any one of these genes.13
14
The most likely explanation for this is that other E2F family members are capable of compensating for the loss of another family member. Compensation could occur at the level of gene expression or activity. Expression of E2F family members in the lens did not change with the loss of E2F1, nor did expression of the required binding partner DP-1. Together, these data imply that although other family members are not transcriptionally upregulated to compensate for the loss of E2F1, they are still expressed with a DP-binding partner and therefore could functionally compensate for the loss of E2F1. In fact, the expression level of E2F target genes was not changed in the lenses of E2F1 null mice, providing further indication that this is likely.
Regulation of E2F2 and -3 Expression
Previously, we have shown that expression of E7 in the lens results in proliferation and apoptosis in the fiber cell compartment5
and that the increased proliferation and apoptosis are partially dependent on E2F1.16
Although it has been shown that deregulated expression of E2F2 in fiber cells can lead to a similar phenotype as that in lenses with deregulated expression of E2F129
or expression of E7, it was not understood whether deregulated expression of E2F2 contributes to the phenotype of lenses with compromised pRB function. In this study, RNA levels of both E2F2 and -3a were increased in the presence of E7 but only the E7-induced increase in E2F3a expression was entirely dependent on E2F1. Therefore, if other E2Fs mediate the remaining proliferation and apoptosis seen in the lenses of
AE7;E2F1-null mice, E2F2 is the most likely candidate. Alternatively, it is conceivable that in the absence of functional pRB, E2F3b or -5 may activate targets that would support proliferation.
It is not surprising that E2F1, -2, and -3a are the only E2Fs to show an increase in expression in the
AE7 lens, because only these E2Fs have E2F binding sites in their promoters. E2F3b, -4, and -5 have no known E2F binding sites in their promoters, and therefore their expression should not be affected by changes in E2F expression or activity. Therefore, E7-induced changes in expression levels or activities of E2F1, -2, and -3a would not be expected to effect E2F3b, -4, or -5.22
However, because only E2F2, and not E2F3a, shows an E2F1-independent response to expression of E7, the regulation of these two E2Fs must be different. Increased expression of E2F3a is dependent on E2F1, but normal expression of E2F3a is not, and therefore it must be regulated by factors whose activity is not affected by expression of E7. E2F3b is a possible candidate to regulate expression of basal levels of E2F3a, because E2F3bs expression levels are unaffected by loss of E2F1 or expression of E7. In addition, E2F3b contains the same DNA-binding domain as E2F3a and thus should be able to bind the E2F-binding sites in the promoter of E2F3a. However, it is also possible that E2F3as expression is normally regulated by a non-E2F factor.
Unique Roles for Individual E2Fs in the Lens Fiber Cells
Previous studies have shown that E2Fs are responsible, at least in part, for mediating the effects of inactivated pRB.16
17
However, it is not possible from these studies to discern distinct roles for individual E2Fs. By determining the levels of RNA expression for E2Fs and a battery of E2F target genes in pRB-compromised lenses in the presence and absence of E2F1, we have uncovered potential unique roles for E2F1. Based on their expression levels in the lenses of
AE7;E2F1-null mice compared with that in the lenses of
AE7;E2F1-sufficient mice, we grouped E2F target genes into three categories: those whose expression is partially dependent on E2F1, those that require E2F1, and those that are completely E2F1 independent. Most of the target genes examined fall into the first category. Cdc2, B-myb, and cyclin A2 all showed increased expression in the
AE7;E2F1-null lens, but at a level slightly lower than that in the
AE7;E2F1-sufficient lens. This indicates that for these genes, E2F1 plays a role in the E7-induced increased expression, but that other factors, perhaps E2F2, also contribute to their deregulated expression. It is of note that the degree of E2F1 dependency among the examined target genes was not the same (Fig. 7)
, suggesting that the decrease in E7-induced expression results from the loss of specific transcriptional activities and is not a secondary effect resulting from the decreased proliferation in the
AE7;E2F1-null lens.
Target genes in the second category, those that require E2F1, are E2F3a, as discussed earlier, and p19ARF. p19ARF is not detected in the lenses of either nontransgenic or E2F1-null mice, but shows a marked increase in expression in the lenses of
AE7 mice. This increase is completely dependent on E2F1, because p19ARF is not detected in the lenses of
AE7;E2F1-null mice. This is consistent with previous reports that p19ARF is a unique target of E2F1 and not the other family members.25
p19ARF has been shown to stabilize p53 protein levels, because of its ability to block mdm2-mediated p53 degradation. Therefore, it is proposed that p53 acts downstream of p19ARF in a proapoptotic, tumor-suppressor pathway.27
28
According to this model, increased activity of p53 when p19ARF is expressed could contribute to p53-dependent apoptosis. Based on our results, we conclude that the loss of p19ARF expression and the consequent decrease in p53 stability leads to a quantitative reduction in p53-dependent apoptosis in the lenses of
AE7;E2F1-null mice compared with that in
AE7 mice. This conclusion is consistent with previous studies showing that, although loss of E2F1 reduces p53-dependent (as well as p53-independent apoptosis) in the lens of
AE7 mice, this reduction is only partial.16
The expression level of p53 mRNA may also play a role in the partial rescue of E7-induced apoptosis in the
AE7;E2F1-null lens. Although p19ARF expression requires E2F1, increased expression of p53 is only partially dependent on E2F1. Thus, in the lens fiber cells of the
AE7 mice, there must be factors in addition to E2F1 that are capable of inducing expression of p53 and consequently p53-dependent apoptosis. It is possible that, in contrast to tissue culture systems, E2F family members other than E2F1 are capable of inducing apoptosis in vivo. Because E2F2 shows increased expression in the
AE7 and
AE7;E2F1-null lens, it is a potential mediator of this proapoptotic activity. In addition, because apoptosis in Rb-null lenses can be partially rescued by an E2F3-null mutation,18
E2F3 must have proapoptotic role as well.
The third category of E2F target genes is that in which expression is completely independent of E2F1. N-myc is a potential target for E2Fs, because E2F consensus binding sites are located within the N-myc promoter.26
30
Northern blot analysis showed that there was no significant change in the level of N-myc RNA when E7 was expressed in the presence or absence of E2F1, implying that despite the presence of E2F binding sites in its promoter, N-myc is not a target of E2F1, -2, or -3a regulation in the lens. In situ hybridization showed clearly that N-myc had an expanded pattern of expression in the
AE7 lens that was not dependent on E2F1 status. It has been shown in the chick lens that N-myc expression increases during the early steps of withdrawal from the cell cycle by the fiber cells, but is repressed once these cells have fully elongated and differentiated.31
Therefore, in the
AE7 lens where fiber cells do not withdraw from the cell cycle or differentiate, we suggest that there is neither a local increase in N-myc expression nor a repression of its expression. The result is an expanded expression pattern for N-myc without any significant changes in total N-myc RNA levels.
In summary, our study shows that in the presence of functional pRB proteins, there is probably compensation for the loss of E2F1 at the level of E2F activity. In contrast, in the absence of functional pRB proteins, unique roles for E2F1 become apparent. Under this latter condition, expression of numerous E2F targets genes, including specific E2Fs themselves, were differentially regulated by E2F1. An important finding is that the changes in expression of two of the genes studied, E2F3a and p19ARF, in lenses where pRB function was compromised, appeared to rely entirely on E2F1. Also of importance, the finding that E2F2 expression was increased in the absence of functional pRB proteins in an E2F1-independent manner suggests another factor that may contribute to the proliferation and apoptosis observed in pRB-compromised fiber cells. The results of our study suggest that under normal conditions during lens fiber cell differentiation, multiple E2Fs may participate in regulation of some target genes, whereas others may be preferentially regulated by E2F1. Future studies are necessary to determine the normal in vivo nature of pRB-E2F-target gene regulation in lens fiber cell differentiation.
| Acknowledgements |
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| Footnotes |
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Submitted for publication September 28, 2001; revised January 15, 2002; accepted January 18, 2002.
Commercial relationships policy: N.
The publication costs of this article were defrayed in part by page charge payment. This article must therefore be marked "advertisement" in accordance with 18 U.S.C.
1734 solely to indicate this fact.
Corresponding author: Anne E. Griep, University of Wisconsin Medical School, 1300 University Avenue, Madison, WI 53706; aegriep{at}facstaff.wisc.edu.
| References |
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F-crystallin gene is mediated through a lens-specific element containing the
F-1 binding site DevDyn 196,143-152[Medline][Order article via Infotrieve]
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