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1From the Departments of Ophthalmology and 2Physiology and Neuroscience, Medical University of South Carolina, Charleston, South Carolina; and the 3Department of Cell Biology, Department of Medicine, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma.
| Abstract |
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METHODS. Gene expression changes were identified by microarray and confirmed by real-time RT-PCR. Cone photoreceptors were stained by peanut agglutinin (PNA) lectin in the flatmounted retina. The 9- or 11-cis retinal was supplied by intraperitoneal injections.
RESULTS. The short-wavelength (SWL) cone opsin mRNA was markedly decreased at 2 weeks of age, whereas the decrease in the middle-wavelength (MWL) cone opsin mRNA occurred relatively later in age. In contrast, the rhodopsin mRNA level did not show any significant change at all the ages analyzed. Consistent with the cone opsin changes, the cone transducin
-subunit mRNA decreased at both 4 and 8 weeks of age, whereas again the rod transducin
-subunit did not show any significant change. Rpe65/ mice showed significant cone loss in both the central and ventral retina between 2 and 3 weeks of age. Administration of 9- or 11-cis retinal to Rpe65/ mice 2 weeks of age increased cone density by twofold in these areas.
CONCLUSIONS. In the Rpe65/ mouse, the expression of cone-specific genes is downregulated and is accompanied by cone degeneration at early ages. Early administration of 9- or 11-cis retinal can partially prevent cone loss, suggesting that the absence of 11-cis chromophore may be responsible for the early cone degeneration.
The homozygous RPE65-knockout (Rpe65/) mouse lacks 11-cis retinal and accumulates excessive levels of all-trans retinyl esters in the RPE,1 suggesting that the RPE65 protein is essential for the isomerization of all-trans retinyl esters to generate 11-cis isomers. Electroretinogram (ERG) recordings in Rpe65/ mice revealed small rod but no cone responses in both young adult and aged animals.10 11 The remaining rod response is supported by the generation of isorhodopsin.10 11 12 Consistent with the functional analysis, the Rpe65/ retina is known to contain no detectable rhodopsin, whereas it has normal rod opsin structure and close to normal amounts of regenerable opsin,10 suggesting that the absence of chromophore is responsible for the diminished ERG response in rods. Histologic results showed a gradual reduction of rod outer segment length and a decrease in number of photoreceptor nuclei in aged Rpe65/ mouse retinas.1 13 Recent studies have shown that systemic administration of 9- or 11-cis retinal can partially restore rhodopsin regeneration and thereby improve rod responses in the Rpe65/ mouse.10 11 12
In contrast to the knowledge about rods, little is known about cone structure and function in the Rpe65/ mouse. Although it has been suggested by an early study that cone function may be preserved in the 1- to 12-month-old Rpe65/ mouse,14 experiments by Seeliger et al.15 have demonstrated that the remaining photoresponse at 4 to 5 weeks is from rod photoreceptors. These researchers did not find evidence of cone function.
The present study examined cones and cone opsin expression in the Rpe65/ mouse by combining immunohistochemical and molecular biological analyses to elucidate expression changes in cone-specific genes related to cone degeneration in this mouse model.
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Microarray Procedures and Data Analysis
Age-matched wt and Rpe65/ animals (postnatal day [P]60) were killed by decapitation and the retinas isolated. All mice used for the gene expression analysis were euthanatized at 11 AM to eliminate any potential circadian rhythm effects. Retinas from four animals per genotype were pooled, and data points were examined in duplicate. Total RNA was isolated (TRIzol; Invitrogen-Life Sciences, Gaithersburg, MD), followed by a clean-up with minicolumns (RNAeasy; Qiagen, Valencia, CA). The quality of the RNA was examined by gel electrophoresis (quantity and integrity of the 18s and 28s ribosomal RNA bands) and spectrophotometry (260/280 nm ratio).
Five micrograms of total RNA was used to generate double-stranded cDNA (Invitrogen, Carlsbad, CA), which then served as a template for the generation of biotinylated cRNA (BioArray HighYield RNA transcript labeling kit; Enzo Diagnostics; Farmingdale, NY). The labeled, purified probes were fragmented in 8 M Na+-citrate buffer and used for hybridization on U74A oligonucleotide arrays (Affymetrix, Santa Clara, CA). Hybridization and readout were performed by the DNA Microarray Core Facility at the Medical University of South Carolina (Affymetrix Fluidics Station, used according to the instructions indicated in the Affymetrix Expression Analysis Technical Manual).
Microarrays were scanned (Affymetrix scanner and Microarray Suite 5.0 software; Affymetrix). The expression data were normalized using Dchip, a model based program that allows for the comparison of multiple arrays.16 Data from duplicates were averaged, expressed as mean ± upper and lower boundaries and filtered with respect to the multiples of change (x-fold).
Quantitative Real-Time Reverse TranscriptionPCR
To verify the data obtained from microarrays, mRNA levels of the short- (SWL) and middle-wavelength (MWL) cone opsin, rhodopsin, and cone and rod transducin
-subunits were analyzed by quantitative real-time RT-PCR using specific primer pairs (Table 1) . By using the Primer3 software (http://www-genome.wi.mit.edu/cgi-bin/primer/primer3.cgi/ provided in the public domain by the Whitehead Institute, Massachusetts Institute of Technology, Cambridge, MA), all primer sets were designed from mRNA sequences spanning big introns to avoid amplification from possible genomic DNA contamination. The primer sequences were checked by a BLAST search to assure sequence specificity.
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Cone Density Analysis
Wholemounted Retina Preparation.
Retinas of the experimental animals were prepared as described previously.2 Briefly, the retinalens complex was fixed in 4% formaldehyde solution in phosphate-buffered saline (PBS, pH 7.4). After several washes in PBS, FITC-conjugated peanut agglutinin (PNA; Sigma-Aldrich, St. Louis, MO) was added for overnight incubation. After several washes in PBS, the lens was detached from the retina, which was flatmounted and covered by a coverslip after the application of several drops of anti-fade solution (Prolong; Molecular Probes, Eugene, OR).
Microscopic Analysis.
The samples were analyzed with a fluorescence microscope (Axioplan II; Carl Zeiss Meditec, Inc., Jena, Germany) equipped with a digital camera. Images were captured (Spot-RT Camera, with Spot software, ver. 3.0; Diagnostic Instruments, Sterling Heights, MI) and processed (Photoshop; Adobe Systems, Mountain View, CA).
Cell Count.
Cones were counted in the following retinal areas: central (within 500 µm of the optic nerve) and peripheral (between the central area and retinal edge). Peripheral, ventral, and dorsal areas were counted separately. Four micrographs each, in the central and the peripheral (two dorsal + two ventral) areas, were taken in each animal, at 1000x magnification. The number of cells was averaged and the data analyzed by Students t-test.
Preparation and Injection of Retinals
The two retinal isomers, 9-cis retinal (Sigma-Aldrich) and 11-cis retinal10 were prepared for injection under dim red light. The retinal was dissolved in absolute ethanol (10% final concentration) to which vehicle solution (10% BSA in 0.9% NaCl) was added (see Ref. 13 for more details). Each litter of Rpe65/ mice was randomly divided into noninjected control animals and those that received either 9- or 11-cis retinal injections. Animals were injected intraperitoneally three times every third day, starting at P14 at a dose of 0.25 µg/g body weight. Fourteen days after the final injection, improvement of retinal function was confirmed with electroretinogram recordings (data not shown), and eyes were collected for histology. Mice that received retinal injections together with their respective control littermates were moved into the dark after the first injection, until the end of the experiment. Experiments were performed using at least three animals for each group. To exclude possible influences from the solvent of the retinals, a separate control experiment was conducted that included a noninjected control group, a vehicle injection control group, and the 11-cis retinal injection group, using the same injection route and schedule. Cone opsin mRNA levels were evaluated by real-time PCR.
| Results |
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-subunit; Fig. 1B ). No further cone-specific genes were identified on the array, and for the purpose of this project, no further analysis of the microarray data was performed.
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-subunits (GNAT-1 and GNAT-2, respectively). The mRNA levels of these genes were normalized against 18s rRNA levels. As shown in Figures 2A 2B 2C (representative RT-PCR amplicons) and 2D 2E 2F (average mRNA levels as a percentage of that in wt), the expression levels of the SWL cone opsin (Figs. 2A 2D) in Rpe65/ retina were significantly decreased at the age of 2 weeks, compared with that in the wt of the same age. By the age of 4 and 8 weeks, SWL cone opsin expression was almost completely eliminated. In the same Rpe65/ retinas, the reduction of MWL cone opsin (Figs. 2B 2E) progressed more slowly than that of the SWL cone opsin. Rhodopsin mRNA levels (Figs. 2C 2F) remained unchanged in the same Rpe65/ retinas at all the ages analyzed, consistent with rod degeneration only at late ages in Rpe65/ mice.1 13
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-subunit mRNA showed a significant decrease by 4 weeks of age in the Rpe65/ mice, whereas the rod transducin
-subunit mRNA did not show any significant change in Rpe65/ mice at all ages analyzed (28 weeks of age; Fig. 3 ).
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32% of that in the same area of the Rpe65/ mouse at 2 weeks of age, and to
29% of that in the wt C57BL/6 mouse at 3 weeks of age (Fig. 5) . By 4 weeks of age, large areas in the central and ventral retina became almost "cone free" (Fig. 4B) . The remaining cones were found in the dorsal retina, 571 ± 46 µm from the optic nerve and around the edges of the retina (Fig. 4D , above the dotted line). Cone distribution and density in older mice (9 months of age) remained similar to that at 4 weeks of age (Fig. 4C) , suggesting that cone degeneration in the peripheral retina was significantly slower than in the central area. As shown in Figure 5 , the major cone loss occurred in the central area between 2 and 3 weeks of age.
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30% of that in retina by 5 weeks-of-age (data not shown). Likewise, these three consecutive 11-cis retinal injections also significantly increased cone opsin mRNA when compared with the vehicle control (P < 0.01). The retinas from the treated and control animals were stained with FITC-PNA. As shown in Figure 6 , the PNA-positive cone density was increased by
2-fold over the age-matched, noninjected Rpe65/ control in the central and ventral areas after the 11- and 9-cis retinal treatments (P < 0.05). Both isomers were equally effective in this respect.
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| Discussion |
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Degeneration of Cones Versus Rods in the Rpe65/ Mouse
The Rpe65/ retina has diminished rod photoresponses and appears to lack cone responses in the ERG.14 15 Histologically, rod degeneration occurs at late ages and progresses slowly. By 7 weeks of age, the Rpe65/ mouse has the same number of rows of photoreceptor nuclei as the wt mouse,1 whereas by 12 months of age,
35%, and, by 17 months of age,
50% of the nuclei are lost.13 Administration of 11- or 9-cis retinal can partially restore rod function in Rpe65/ mice over a broad age range (118 months-of-age have been tested thus far).10 11 The present study showed that massive cone degeneration occurs between 2 to 3 weeks of age, and that most of the cones have degenerated by 4 weeks of age in the central area of the retina of this mouse.
Consistent with the different degeneration rates between rods and cones observed by histology, cone opsin and cone transducin expression is reduced at early ages, whereas rhodopsin and rod transducin do not show any significant changes at early ages. The decreased mRNA levels of the cone-specific genes may suggest that cone degeneration is not limited to the outer segments, as the transcription of several cone-specific genes were markedly decreased in cone cells of the knockout mouse. Yet, if 11- or 9-cis retinal was administered before the onset of cone degeneration, a certain percentage of cones could be prevented from degenerating. This result seems to suggest that the absence of 11-cis retinal is responsible, directly or indirectly, for cone degeneration. The fact that the cone loss precedes the rod loss suggests that cones are more susceptible to damage from chromophore deprivation than are rods. This could be explained by in vitro studies showing that cone opsin is less stable than rod opsin in the absence of 11-cis retinal.23 However, the chicken cone opsins generating longer-wavelength pigments are in turn less stable than the shorter-wavelength pigments, which is opposite to the results we obtained on the two mouse cone opsins.24 Alternatively, our group has shown that RPE65 is expressed in cones but not in rods.2 Thus, the absence of this protein in cones may be another contributing factor to early cone degeneration; however, the function of RPE65 in cones is still not understood.
Cone Degeneration in Rpe65/ Mouse: SWL Versus MWL Pigment
The mouse retina contain two types of cone pigments, MWL and SWL, which have characteristic regional distributional patterns.25 26 First, unlike other species, the majority of cones in the mouse retina express both cone pigments; however, the ratio of SWL to MWL cone opsins varies in a dorsoventral manner.26 MWL cone opsin is expressed in every cone of the retina, establishing a dorsoventral gradient, whereas SWL cone opsin is distributed in an opposite gradient, sparing the most dorsal rim of the retina. Second, the mouse retina contains approximately three times more SWL than MWL cone mRNA transcripts.26 Although it has not yet been shown at the protein level that there is more SWL cone opsin in the mouse retina, electrophysiological experiments using electroretinograms have shown that the absolute sensitivity of the of the UV peak is approximately four times higher than the MWL cone peak.27
Our molecular results demonstrated that mRNA transcripts for SWL cone opsin decreased earlier than those for MWL cone opsin in the Rpe65/ retina. By 2 weeks of age, SWL cone opsin transcript levels dropped to
50% of wt levels, whereas those for MWL cone opsin decreased relatively later. In addition, the loss of outer segments appeared to start from the central and ventral retina (which has a higher SWL-to-MWL cone opsin ratio) and progress from there to the dorsal region (which has a lower SWL-to-MWL cone opsin ratio). The differential susceptibility of cone photoreceptors across the retina to outer segment loss suggests that different molecular or biochemical events control cone opsin expression and outer segment degeneration in SWL and MWL cones.28
In conclusion, our experiments suggest that if retinas are exposed to exogenous 9- or 11-cis retinal before histologic evidence of cone degeneration, some fraction of cones can be protected from degeneration. These results indicate that the absence of 11-cis chromophore may have a role in the early onset of cone degeneration.
| Acknowledgements |
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| Footnotes |
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Submitted for publication June 4, 2004; revised December 1, 2004; accepted December 8, 2004.
Disclosure: S.L. Znoiko, None; B. Rohrer, None; K. Lu, None; H.R. Lohr, None; R.K. Crouch, None; J.-x. Ma, None
The publication costs of this article were defrayed in part by page charge payment. This article must therefore be marked "advertisement" in accordance with 18 U.S.C.
1734 solely to indicate this fact.
Corresponding author: Jian-xing Ma, BSEB 328B, 941 Stanton L. Young Blvd., Oklahoma City, OK 73104; jian-xing-ma{at}ouhsc.edu.
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