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1From the Departments of Ophthalmology and Visual Sciences, and 3Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan.
| Abstract |
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METHODS. A panel of mice with Pitx2 gene dose ranging from wild-type (+/+) to none (/) was generated. Eye morphogenesis was assessed in animals with each Pitx2 gene dose. We also compared global gene expression in eye primordia taken from e12.5 Pitx2+/+, Pitx2+/, Pitx2/ embryos using gene microarrays. The validity of microarray results was confirmed by qRT-PCR.
RESULTS. Morphogenesis of all extraocular muscle bundles correlated highly with Pitx2 gene dose, but there were some differences in sensitivity among muscle groups. Superior and inferior oblique muscles were most sensitive and disappeared before the four rectus muscles. Expression of muscle-specific genes was globally sensitive to Pitx2 gene dose, including the muscle-specific transcription factor genes Myf5, Myog, Myod1, Smyd1, Msc, and Csrp3.
CONCLUSIONS. Pitx2 gene dose regulates both morphogenesis and gene expression in developing extraocular muscles. The expression of key muscle-specific transcription factor genes is regulated by Pitx2 gene dose, suggesting that sufficient levels of PITX2 protein are essential for early initiation of the myogenic regulatory cascade in extraocular muscles. These results document the first ocular tissue affected by Pitx2 gene dose in a model organism, where the underlying mechanisms can be analyzed, and provide a paradigm for future experiments designed to elucidate additional effects of Pitx2 gene dose during eye development.
Extraocular muscle and somitomeric trunk muscle share many similarities but the two muscle types are likely to be specified by distinct regulatory cascades.21 22 Transplanted somitic mesoderm is unable to respond to local cues within the head and differentiate into extraocular muscles.22 Conversely, transplanted cranial mesoderm is unable to respond to local cues within the trunk and form skeletal muscles.22 Pax3 is an essential early activator of the myogenic regulatory cascade in the somites, but is not expressed in the cranial mesoderm from which extraocular muscles are derived.22 Pax7 is expressed in the cranial mesoderm precursors to extraocular and other head muscles and has been proposed as a functional substitute for Pax3, but no supporting genetic evidence has been reported.22 Myf5, Myog, and Myod1, which are essential for differentiation of somitomeric muscle, are all expressed in extraocular muscle primordia, but their functional significance has not been established.23 24 25 26 Taken together, these observations indicate that the regulatory cascades required for development of extraocular muscles remain poorly understood.
Myofibers in extraocular muscles are derived from mesoderm, whereas muscle connective tissue cells arise from neural crest.27 Pitx2 encodes a homeodomain transcription factor expressed in both neural crest and mesoderm during eye development, including extraocular muscle primordia.27 Pitx2/ embryos exhibit complete agenesis of extraocular muscles, providing direct evidence of essential function in their early specification.27 28 29 30 31 The response of individual cell types and organs to variations in Pitx2 gene dose plays a significant role in normal and abnormal organ development. This mechanism was first suggested by the demonstration that heterozygous mutations for gain- or loss-of-function mutations in human PITX2 contribute to Axenfeld-Rieger syndrome (ARS), a human haploinsufficiency disorder including ocular anterior segment defects and a significant risk of glaucoma.32 33 34 35 Subsequently, an essential role for Pitx2 gene dose in regulating pituitary, heart, and craniofacial development has been established.36 37 Extraocular muscle defects are sometimes associated with ARS, although the underlying genetic defects have not been identified.38 Based on these observations, we hypothesized that Pitx2 gene dose may play a significant mechanistic role in specifying extraocular muscles during development.
To test this hypothesis directly, we generated an allelic series of mice expressing different levels of Pitx2.37 We examined muscle morphology, the expression of muscle-specific proteins, and global gene expression profiles, to determine the gross and molecular effects of various Pitx2 doses on extraocular muscle development. The results confirm our hypothesis that the response to Pitx2 gene dose is an essential mechanism in the regulation of extraocular muscle development. Furthermore, Pitx2 is likely to be a very early initiator of extraocular muscle development by activating a regulatory cascade including Myf5, Myog, Myod1, and, potentially, other muscle-specific transcription factor genes. The results are also significant because they document the first experimental link between Pitx2 gene dose and an ocular tissue.
| Materials and Methods |
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Timed-Pregnant Matings
Three types of timed-pregnant matings were performed to produce embryos representing all levels of Pitx2 expression within the allelic series described herein. Breedings between Pitx2+/ male and female mice were used to generate Pitx2+/+, Pitx2+/, and Pitx2/ embryos. Likewise, Pitx2+/neo mice were bred to produce Pitx2+/+, Pitx2+/neo, and Pitx2neo/neo embryos. Pitx2neo/ compound-heterozygotes were produced by breeding Pitx2+/neo males to Pitx2+/ females. The morning after mating was designated as embryonic day (E)0.5. Pregnant mice were killed by cervical dislocation at either E12.5 or E14.5 and embryonic tissue was either processed for histology or stored in RNA stabilization reagent (RNAlater; Ambion, Austin, TX) at 20°C for subsequent RNA isolation. DNA was isolated from extraembryonic membranes and genotyping was performed by polymerase chain reaction.39
Tissue Preparation and Histology
Embryos intended for histology were fixed in 4% paraformaldehyde in PBS for 2 to 4 hours at room temperature. Fixed embryos were washed three times in PBS, dehydrated through graded ethanol, washed three times in methyl salicylate, and embedded in paraffin (Paraplast Plus; Fisher Scientific, Pittsburgh, PA). Sections were cut at 7 µm and mounted on slides (Superfrost Plus; Fisher Scientific) using poly-L lysine solution (Sigma-Aldrich, St. Louis, MO) diluted 1:10 in DEPC-treated water. Dewaxing and rehydration was performed according to standard methods.
Immunohistochemistry and Photography
Immunohistochemistry was performed with a mouse monoclonal antibody to developmental myosin heavy-chain (Vector Laboratories, Burlingame, CA). Antigen retrieval was performed by boiling in 10 mM citrate buffer (pH 6.0), for 10 or 20 minutes, followed by rinsing in water for 10 minutes to cool. Endogenous peroxidase activity was quenched for 10 minutes in 3% hydrogen peroxide in water, followed by a 30-minute block in signal enhancer (ImageiT; Invitrogen, Carlsbad, CA). Antibody blocking was performed with a kit (Mouse On Mouse [MOM]; Vector Laboratories) according to the manufacturers recommendations. Primary antibody was applied at a 1:5 dilution in MOM diluent (Vector Laboratories) and incubated overnight at 4°C. Biotin-labeled anti-mouse IgG supplied in the kit was used as a secondary antibody. A tyramide signal-amplification (TSA) kit (Invitrogen) was used to visualize sites of myosin heavy-chain expression. Photography was performed on a fluorescence microscope (Eclipse 800; Nikon, Tokyo, Japan) using matched aperture and exposure settings to hold signal detection invariant between genotypes.
Gene Expression Analysis
Eye primordia were microdissected from E12.5 Pitx2+/+, Pitx2+/, and Pitx2/ embryos. Total RNA was isolated from the eyes of individual embryos (RNAqueous Micro Kits; Ambion). cDNA and biotin-labeled cRNA was generated from 1 µg of RNA from each embryo (MessageAMP kits; Ambion). The in vitrolabeling reactions were extended overnight to increase yield. Labeled cRNA was hybridized to mouse gene microarrays (Mouse Genome 430 ver. 2.0 GeneChip; Affymetrix, Santa Clara, CA) and processed by the standard protocol. Gene expression profiles were generated from four animals from each of the three Pitx2 genotypes using a total of 12 arrays. Initial data preparation was then performed with a methodology that performed background correction, quantile normalization, and summarization of expression scores (Microarray Suite ver. 5.0. Robust Multichip Average [RMA]; Affymetrix).40
A two-stage, direct-screening procedure based on the Benjamini and Yekutieli41 reconstruction of the false-discovery rate confidence interval (FDR-CI) was used to assign probabilities to the x-fold changes of gene responses.42 43 44 This method is distinct from approaches based on the conventional t-test, because it allows the experimenter to control statistical significance and biological significance in determining positive differential responses.42 In the first stage, a set of genes with putative expression changes was identified with an FDR-
test. In the second stage, this set of genes was further screened to establish biological and statistical significance. A minimum x-fold change (fcmin) of 1.5-fold was established as the threshold for establishing biological significance and all probesets with P < 1 were reported. For hierarchical analysis, the top 200 FDR-CI constrained gene profiles were standardized to have mean of 0 and SD of 1 across all groups and were clustered using hierarchical clustering implemented in Cluster and TreeView.45 Samples were grouped by expression profiles rather than genotype and Euclidean distance was chosen for clustering as the measure of expression profile similarity. Muscle-specific array hits were identified by automated and manual inspection of the National Center for Biotechnology Information (NCBI, Bethesda, MD) Entrez Gene records. Original.cel data files will be deposited with the Gene Expression Omnibus (www.ncbi.nih.gov/geo/).
Real-Time PCR Confirmation
Real-time RT-PCR was performed (TaqMan Gene Expression Arrays) on custom-designed microfluidics cards (Affymetrix). E12.5 Pitx2+/+, Pitx2+/, and Pitx2/ embryos were obtained from Pitx2heterozygous matings. The eyes and surrounding periocular mesenchyme were microdissected and stored (RNAlater; Ambion). Total RNA was extracted from homogenized tissue (RNAqueous-micro kit; Ambion). cDNA was reverse transcribed from 1 to 5 µg total RNA by (SuperScript III with random primers; Invitrogen-Life Technologies, Gaithersrburg, MD) according to the manufacturers protocol. cDNA was diluted as 1 µg total RNA/100 µL final volume (10 ng/µL). Gene expression assays (TaqMan; Applied Biosystems, Inc., Foster City, CA) were performed with master mix (RealTime Ready; Q.BIOgene, Carlsbad, CA) in a thermal cycler (iCycler; Bio-Rad, Hercules, CA) according to the manufacturers protocol. Relative changes (x-fold) compared with wild type were calculated by using the 2D
Ct method and normalized to each of four independent "housekeeping" genes (Hprt, Arl10c, Hsd17b12, and 18S rRNA) whose expression has been independently confirmed as unaffected by the Pitx2 genotype. Standard error was computed from four samples of each genotype. Relative expression levels obtained after normalization to Hprt are depicted in Figure 4 , but normalization to the other three housekeeping gene yielded analogous results.
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| Results |
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Gene Expression Profiles
To gain further insight into the mechanisms underlying Pitx2 gene dose effects on extraocular muscle development, we initiated a comparison of global gene expression in eye primordia isolated from E12.5 Pitx2+/+, Pitx2+/, and Pitx2/ embryos (n = 4 per genotype). These genotypes correspond to 100%, 50%, and 0% of the normal PITX2 function levels, respectively. RMA, a robust and well-established methodology, was used to quantify signal intensity and normalize signals.40 Normalized data were then analyzed using the robust two-step FDR-CI method to identify statistically significant (P < 1) differentially expressed genes.41 42 This approach is now well-established.43 Hierarchical clustering of the top 200 differentially expressed genes revealed striking patterns. Three distinct patterns of gene expression were observed based on their response to Pitx2 gene dose (Fig. 3) . Expression of genes in set A decreased in parallel with Pitx2 gene dose, indicating that these genes are dose sensitive and activation correlates positively with PITX2 protein levels. Expression of genes in set B was reduced in eyes of Pitx2/ but not Pitx2+/ embryos, indicating that these genes are not affected by Pitx2 gene dose. Finally, expression of genes in set C increased with decreasing Pitx2 gene dose, indicating that these genes are dose sensitive, but that activation correlates negatively with increasing PITX2 protein levels. Because whole eye primordia were used as the RNA source for these experiments, differentially expressed genes represent both myogenic and nonmyogenic functions. We next evaluated each gene in sets A, B, and C to identify those that could be confirmed as muscle-specific based on previously published results or publicly available expression data. In all, 50 muscle-specific, dosage-sensitive genes were identified (Table 1) . Consistent with the decrease of extraocular muscle morphogenesis in response to Pitx2 gene dose, expression of all the muscle-specific genes decreased in parallel with Pitx2 gene dose (Fig. 3 ; set A). No muscle-specific genes were identified in set C, whose expression increases with decreasing Pitx2 gene dose.
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Pitx2 Dose Dependence of Muscle-Specific bHLH Transcription Factor Genes
To gain insight into potential underlying mechanisms that might account for the dependence of extraocular muscle development on Pitx2 gene dose, we analyzed the biological functions of the muscle-specific dose-dependent genes. As would be predicted, genes with a variety of biological functions were represented (Fig. 5) . Prominent members of the list are Myf5, Myog, Myod1, Smyd1, Msc, and Csrp3, all of which encode transcription factors or nuclear-associated proteins that have been established as essential for skeletal and/or cardiac muscle differentiation and function46 47 48 49 50 (Fig. 5 , Table 1 ). Numerous genes encoding components of the muscle structuralcontractile apparatus or proteins required for muscle-specific metabolism were also represented (Table 1 , Fig. 5 ).
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| Discussion |
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There are seven extraocular muscles in the mouse (Fig. 2F) : the superior and inferior oblique muscles, the four rectus muscles, and the retractor bulbi muscle. Humans lack the retractor bulbi muscle, and so we focused our attention on understanding the effects of Pitx2 gene dose on the other six. We demonstrate that morphogenesis of extraocular muscles was highly sensitive to Pitx2 gene dose effects. The superior and inferior oblique muscles were consistently more sensitive than the four rectus muscles. This is strikingly similar to the function of Pitx2 in the developing pituitary gland, where there is a strong correlation between overall morphogenesis of Rathkes pouch, the early pituitary primordium, and the level of Pitx2 gene dose.37 In addition, the five neuroendocrine cell lineages of the mature anterior pituitary gland are differentially sensitive to the effects of Pitx2 gene dose, with gonadotropes being the most sensitive and lactotropes and corticotropes the least sensitive.37 Similar to the pituitary, the extraocular muscles are composed of a mixture of different fiber types, distinguished in mature muscles by their diameter, innervation pattern, oxidative potential (number and size of mitochondria, pigmentation, extent of vascularization) and ability to transmit an action potential (extent of sarcoplasmic reticulum).51 52 We predict that, as seen in the pituitary, the different fiber types may be differentially sensitive to Pitx2 dosage and that the overall reductions in extraocular muscle size seen in our mutants may be related to preferential loss of specific fiber types. Unfortunately, most mice in our allelic series do not survive beyond birth, and suitable molecular markers for distinguishing between the different muscle lineages or their precursors at early time points have not yet been identified.
Previously established functions of PITX2 in other organ systems suggest molecular mechanism(s) that may underlie the effects of Pitx2 gene dose on the development of extraocular muscle. Decreased proliferation of muscle precursors may be a contributing factor, since Pitx2 has been implicated as playing a role in cellular proliferation in skeletal and cardiac muscles.53 However, we find no evidence of proliferative changes in the extraocular muscle primordia of our allelic series (data not shown). Alternatively, increasing levels of apoptosis could also explain the progressive reduction of extraocular muscle size in our mutants. Apoptosis has been implicated in the loss of pituitary cells in Pitx2 mutant mice.54 However, we find no evidence of increased apoptosis in the mutant extraocular muscle primordia by TUNEL assay (data not shown). Therefore, it seems likely that precursors fated to become extraocular muscle cells are present in animals of all Pitx2 genotypes but fail to initiate or sustain their muscle differentiation program efficiently in the case of animals with reduced PITX2 function and never initiate the program in animals with no PITX2 function. Some muscle-specific genes affected by Pitx2 gene dose may be direct targets of PITX2 regulation, as suggested by the observation that a subset contain
1 predictes PITX2 binding sites within 2 kb of the transcription-initiation site (data not shown). Others may be indirect PITX2 targets or simply markers of muscle the muscle phenotype. Identification of the regulatory elements required for endogenous expression of each gene and testing of these elements for responsiveness to PITX2 will be necessary, to distinguish between these possibilities.
An important insight into the underlying mechanism(s) is offered by our gene expression analysis, which demonstrates that the genes for Myf5, Myog, and Myod1 all require PITX2 for their expression and are sensitive to Pitx2 gene dose effects. These genes encode bHLH class transcription factors that are well established individually and in combination for specification and differentiation of skeletal and other muscle types.55 56 57 58 Expression of these genes in the primordia of extraocular muscles has been noted previously, but the functional significance of this expression has not been clear.26 55 We propose that expression of these muscle-regulatory genes is required singly, or in combination, for specification and/or differentiation of extraocular muscles, similar to what has been demonstrated previously in other muscle groups. Future testing of this hypothesis requires careful analysis of the effects of individual and combinatorial knockouts of these genes on extraocular muscle development.
Among the key differences between extraocular muscles and other muscle groups is that Pax3 and other very early key regulators of trunk myogenesis that are essential for activation of the muscle-regulatory genes are not expressed in the extraocular muscles.21 22 Pax7, which is expressed, has been proposed as a functional replacement for Pax3 in extraocular and other head muscles.22 However, there is to date no genetic evidence to support this hypothesis. Our results provide compelling genetic evidence that PITX2 is essential to initiate muscle differentiation in extraocular muscles through a mechanism that includes activation of a set of muscle-regulatory genes. Although our results establish that Pitx2 is genetically required for activation of Myf5, Myog, and Myod1, it is not possible to determine from our current data whether these genes are direct or indirect downstream targets of PITX2. However, it is interesting to note that the cis-acting regulatory elements required to recapitulate expression from these genes in transgenic mice have been identified, and each contains one or more potential PITX2 binding sites (Refs. 55 59 60 and data not shown). Therefore, it is feasible that each of these key regulatory genes are direct targets of PITX2 in extraocular muscles. Future testing of this hypothesis will require introduction of each relevant transgene into Pitx2 mutant mice, as well as definitive proof of the PITX2-binding sites in cell culture and biochemical assays.
Although our current results are exciting because they identify the first model system for understanding the role of Pitx2 gene dose effects in an ocular tissue, defects in extraocular muscle development and function are unlikely to account for the anterior segment changes and glaucoma observed in patients with Axenfeld-Rieger syndrome. However, we hypothesize that other ocular structures, in addition to extraocular muscles, are sensitive to Pitx2 gene dose, and our current results establish that our Pitx2 allelic series combined with gene expression analysis are likely to be a powerful approach for testing this hypothesis.
| Acknowledgements |
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| Footnotes |
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Supported by National Eye Institute Grants EY014126, EY07003 (PJG, RK), Research to Prevent Blindness (PJG), The Glaucoma Foundation (PJG), and the Elmer and Silvia Sramek Charitable Foundation (SZ, RK).
Submitted for publication November 3, 2005; revised December 22, 2005; accepted March 14, 2006.
Disclosure: A.G. Diehl, None; S. Zareparsi, None; M. Qian, None; R. Khanna, None; R. Angeles, None; P.J. Gage, None
The publication costs of this article were defrayed in part by page charge payment. This article must therefore be marked "advertisement" in accordance with 18 U.S.C.
1734 solely to indicate this fact.
Corresponding author: Philip J. Gage, Department of Ophthalmology and Visual Sciences, University of Michigan Medical School, 350 Kellogg Eye Center, 1000 Wall Street, Ann Arbor, MI 48105; philgage{at}umich.edu.
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Pitx2 pathway mediating cell-type-specific proliferation during development. Cell. 2002;111:673685.[CrossRef][Web of Science][Medline][Order article via Infotrieve]This article has been cited by other articles:
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J. Weng, J. Luo, X. Cheng, C. Jin, X. Zhou, J. Qu, L. Tu, D. Ai, D. Li, J. Wang, et al. Deletion of G protein-coupled receptor 48 leads to ocular anterior segment dysgenesis (ASD) through down-regulation of Pitx2 PNAS, April 22, 2008; 105(16): 6081 - 6086. [Abstract] [Full Text] [PDF] |
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H. P. Shih, M. K. Gross, and C. Kioussi Cranial muscle defects of Pitx2 mutants result from specification defects in the first branchial arch PNAS, April 3, 2007; 104(14): 5907 - 5912. [Abstract] [Full Text] [PDF] |
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F. Dong, X. Sun, W. Liu, D. Ai, E. Klysik, M.-F. Lu, J. Hadley, L. Antoni, L. Chen, A. Baldini, et al. Pitx2 promotes development of splanchnic mesoderm-derived branchiomeric muscle Development, December 15, 2006; 133(24): 4891 - 4899. [Abstract] [Full Text] [PDF] |
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