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1From the Department of Ophthalmology, College of Medicine, King Saud University, Riyadh, Saudi Arabia; the 3Department of Ophthalmology, Mayo Clinic, Rochester, Minnesota; and the 4Department of Radiology, University of Arkansas Medical Center, Little Rock, Arkansas.
| Abstract |
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METHODS. This case–control study involved 21 patients, 159 control subjects for mitochondrial (mt)DNA sequencing, and 40 control subjects for relative mtDNA content. Patients were identified who had had decreased vision since childhood due to bilateral optic neuropathy characterized by central visual loss with no other major neurologic or ocular abnormality and no clinical evidence of a mitochondrial syndrome. Clinical examination, electroretinograms, and neuroimaging were performed; the entire mtDNA coding region was sequenced in leukocytes of all patients; relative mtDNA content was assessed; and OPA1 and OPA3 nuclear genes associated with dominant and recessive optic atrophy, respectively, were sequenced. Main outcome measures were clinical description, nonsynonymous (NS) mtDNA nucleotide changes, relative mtDNA content, and OPA1 and OPA3 nucleotide changes.
RESULTS. Twenty-one unrelated patients (16 male and 5 female; mean age at first examination 13.6 years) had bilateral moderate, relatively symmetric optic neuropathies and normal neurologic examinations other than strabismus in 11 and congenital nystagmus in 9. Four patients had optic nerve hypoplasia. One patient had the nt 11778 primary Leber hereditary optic neuropathy (LHON) mutation, and three others had mtDNA nucleotide changes predicted to be pathologic. The entire group had a small increase (6.7%) in relative mtDNA content of indeterminate statistical significance. No patient had a polymorphism or mutation of OPA1 or OPA3.
CONCLUSIONS. A minority of these young patients with sporadic bilateral optic neuropathy had abnormalities of the mitochondrial parameters evaluated. This bilateral optic neuropathy may be due to other genetic, epigenetic, or environmental injury to the optic nerve or to mitochondrial defects not studied.
The differential diagnosis of optic neuropathy in childhood is extensive6 and the expense and complexity of a complete diagnostic evaluation often precludes definitive diagnosis. Mitochondrial cytopathies,7 including LHON,8 may affect optic nerve function at an age too young for the individual to report loss of vision. These individuals, therefore, describe lifelong bilateral reduced vision rather than subacute visual loss. They are typically young when the disease is diagnosed and usually do not have a multigenerational maternal family history.
Given the strong association of bilateral, symmetric optic neuropathy with mitochondrial disorders, we decided to investigate whether sporadic bilateral optic neuropathies in children are associated with undiagnosed mitochondrial abnormalities.
| Methods |
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Exclusion criteria included (1) an abnormal neurologic history or examination (except for strabismus or congenital nystagmus), including birth trauma, developmental delay, mental retardation, or seizures; (2) a cause of significant visual loss in either eye independent of optic neuropathy; (3) evidence on history, examination, or neuroimaging of a medical, surgical, or syndromic cause of optic neuropathy; or (4) refusal to participate. Optic disc size and the potential presence of optic nerve hypoplasia (ONH) were not exclusion criteria. Patients were selected from the Neuro-ophthalmology Clinic at the King Khaled Eye Specialist Hospital, a major national referral site. Institutional review board (IRB)/Ethics Committee approval was obtained. The protocol adhered to the guidelines of the Declaration of Helsinki.
Hospital records were reviewed, and full neuro-ophthalmic examinations and dilated funduscopic examinations were performed on all patients. Color vision (CV) was assessed with Ishihara pseudoisochromatic plates. Patients had either Goldmann manual kinetic perimetry (Haag Streit International, Köniz-Bern, Switzerland); automated, white-on-white stimulus, static perimetry (Humphrey Field Analyzer II; Carl Zeiss Meditec, Inc., Dublin, CA); or both, if they were able to participate. Electroretinograms (ERGs) were performed on an evoked-potential system (Spirit; Nicolet Instrument Corp., Madison, WI), according to the manufacturers suggested protocol. Brain neuroimaging was obtained on an MRI (Magnetom Allegra 3.0 Tesla) or CT (Somatom Sensation 4; Siemens, Munich, Germany) scanner.
Control Subjects
All control subjects were King Faisal Specialist Hospital and Research Centre blood donors who represented the spectrum of Saudi Arabs and who reported no symptomatic metabolic, genetic, or ocular disorders on an extensive questionnaire regarding family history, past medical problems, and current health. The control group for mtDNA sequencing consisted of 159 individuals (106 males and 53 females, mean age, 46.3 ± 3.8 years) and for relative mtDNA content, 40 different relatively young individuals (16 males and 24 females; mean age, 18.1 ± 2.1 years). Family information was obtained by history. All patients and control subjects were Saudi Arabs.
Sample Collection and DNA Extraction
A single-density gradient (Ficoll-Paque-PLUS; Pharmacia Biotech AB, Uppsala, Sweden) was used for lymphocyte isolation from peripheral blood, as detailed previously.9 This method ensures a high yield of lymphocytes with little contamination of granulocytes or monocytes. DNA was extracted from whole blood samples of all patients and control subjects with a DNA isolation kit (Puregene; Gentra Systems, Minneapolis, MN).
Mitochondrial DNA Amplification and Sequencing
The entire coding region of the mitochondrial genome was amplified in 24 separate polymerase chain reactions (PCRs) using single set cycling conditions as detailed elsewhere10 for all patients and control subjects. Primers were designed to avoid amplifying mtDNA-like sequences in the nuclear genome. Each successfully amplified fragment was directly sequenced (BigDye Terminator V3.1 Cycle Sequencing kit; Applied Biosystems, Inc. [ABI], Foster City, CA), and samples were run on the a sequencer (Prism 3100 sequencer; ABI).
Sequence Analysis of the Mitochondrial DNA Coding Region
The full mtDNA genome was sequenced except for the D-loop, and sequencing results were compared to the corrected Cambridge reference sequence.11 All fragments were sequenced in both forward and reverse directions at least twice for confirmation of any detected variant. All nucleotide variants from both patients and control subjects were compared to the Mitomap database (last updated August 2007),3 the Human Mitochondrial Genome Database (http://www.genpat.uu.se/mtDB/ provided in the public domain by the Section of Medical Genetics, Department of Genetics and Pathology, Uppsala University, Sweden; last updated November 2007), GenBank (http://www.ncbi.nlm.nih.gov/GenBank/index.html; last updated January 2008), and MedLine listed publications (GenBank and MedLine are provided in the public domain by the National Institutes of Health, Bethesda, MD). Reported homoplasmic synonymous or nonsynonymous (NS) polymorphisms associated with mitochondrial haplogroups12 were excluded from further consideration.13
Prediction of Pathogenicity
Pathologic characteristics of each remaining nucleotide change in patients with PEG and control subjects were assessed according to a combination of standard criteria14 ; an evaluation of interspecies conservation using the PolyPhen database (http://genetics.bwh.harvard.edu/pph/ provided in the public domain by the Division of Genetics, Department of Medicine, Brigham and Womens Hospital, Harvard Medical School, Boston, MA, and the Bork Group, EMBL, Heidelberg, Germany), and the Mamit-tRNA Web site (http://mamit-trna.u-strasbg.fr/index.html, provided in the public domain by the Institute of Molecular and Cell Biology, Strasbourg, France), when a sequence variant is detected in the tRNA region; assessment of the possible impact of an amino acid substitution on three-dimensional protein structure (Protean program, part of Lasergene ver. 6 software; DNAStar, Inc., Madison, WI), which predicts and displays secondary structural characteristics; and assessment of the possible effect of the mtDNA change on protein function using PolyPhen.15 Therefore, an NS sequence change was considered potentially pathologic if it met all of the following criteria, When applicable: (1) It was not a haplogroup-determining polymorphism; (2) it was not reported in mitochondrial databases or available literature as an established polymorphism; (3) it was not found in at least 100 control subjects of matching ethnicity; (4) it changed a moderately or highly conserved amino acid; (5) Protean predicted an alteration of protein structure; and (6) it was assessed as possibly or probably pathologic by PolyPhen. For previously reported NS nucleotide changes, consideration was given to pathologic status determined by others and by mitochondrial databases in addition to these criteria.
Quantification of Heteroplasmy
Heteroplasmy level was determined for each heteroplasmic sequence variant by the primer extension assay described previously.16 Heteroplasmy level was quantified from fluorescence intensities associated with electrophoretically resolved mutant and wild-type peaks (Genescan 3.7 software program; ABI). Percentage heteroplasmy was calculated using the following equation: [fluorescent band intensity for the mutant/(fluorescent band intensity for the wild-type + fluorescent band intensity for the mutant)] x 100.
Determination of Relative Mitochondrial DNA Content
Relative mitochondrial DNA content may be adjusted upward in certain tissues in the setting of compromised mitochondrial function.17 Competitive multiplex PCR was performed with two simultaneous primer sets as described previously,18 a technique that has been applied successfully to a variety of tissues,19 20 including blood of patients with LHON21 and several other optic neuropathies.4 22 23 One pair was designed to amplify a 450 bp fragment of the ND1 mitochondrial gene and the other pair to amplify a 315-bp fragment of the β-actin nuclear gene, which served as an internal control. Control subjects were run simultaneously with patients. PCR products were separated on 1% agarose gel at 100 V for 1 hour, and the intensity of the two bands was quantified by the use of gel imager (Typhoon 9410; GE-Biosciences, Schenectady, NY). The ratio of ND1 to β-actin was determined for each patient and control by dividing the fluorescence intensity of the ND1 band by the intensity of the β-actin band.
Sequence Analysis of OPA1 and OPA3 Genes
The 31 coding exons, exon–intron boundaries, and promoter regions of the OPA1 gene were amplified by PCR from genomic DNA for all patients and subjected to direct sequencing as described previously.24 The whole OPA3 gene was sequenced in all patients by using the protocol described previously.25
Statistical Methods
All statistical analyses were performed with commercial software (SPSS for Windows, ver. 15.0; SPSS Inc, Chicago, IL). Snellen visual acuities were converted to ordinal values, and CV was quantified on an equal interval scale as the number of a possible 10 Ishihara color plates identified with each eye. Statistical comparisons included bivariate correlation, independent-samples t-test, and the Fisher exact analysis. Bonferroni correction was applied where appropriate.
| Results |
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Table 1 includes clinical characteristics and neuroimaging results of these individuals. Ten patients (48%) had consanguineous parents, but this prevalence of consanguinity is not unusual in the region, and consanguinity did not correlate with other clinical parameters. Five patients described a family history of poor vision, but this typically consisted of an isolated individual who wore glasses. None had an obvious multigenerational or maternal inheritance pattern. Family members were not examined or evaluated genetically. All patients had brain neuroimaging, including computed tomography (CT) in 14 and magnetic resonance imaging (MRI) in 14. No scan revealed a mass, disseminated demyelination, or a developmental anomaly of the brain that might provide an alternative explanation for poor vision. In general, the pregeniculate afferent visual system appeared somewhat small but otherwise intact.
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Sequence Analysis of OPA1 and OPA3 Genes
No polymorphisms or mutations were found in either the OPA1 or the OPA3 gene in any patient, and control subjects had only established polymorphisms reported previously.22
| Discussion |
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These patients have an unclassified form of optic neuropathy. The diagnosis of LHON or LLON was inappropriate on both clinical and genetic grounds. They did not have developmental delay or obvious neurologic disease outside of the optic nerve on examination or neuroimaging. They did not have progressive visual loss or a mutation in OPA1 or OPA3 that would imply the diagnosis of dominant or recessive OA. They also did not have a mitochondrial cytopathy,7 or an obvious syndromic or metabolic optic neuropathy.30 Rather, this study describes a group of patients who incurred sporadic, moderate, symmetrical optic neuropathy in utero or in the first several years of life. It seems likely that strabismus and congenital nystagmus were secondary to poor vision.
Even though we excluded patients with systemic signs of overt mitochondrial dysfunction, we found that patients 18 to 21 had pathologic or potentially pathologic mtDNA nucleotide changes and patients 11, 12, and 18 had substantially elevated relative mtDNA content. In fact, one female with lifelong poor vision (patient 18) had the nt 11778 primary LHON mutation with bilateral moderate optic nerve injury. These observations indicate that mitochondrial function may be abnormal in a portion of patients with this clinical presentation.
The pathologic role of mitochondrial abnormalities in spontaneous optic neuropathies has become increasingly evident over the past two decades.1 The patients described in this report have a comparable severity of symmetric optic nerve injury as patients with LHON and LLON but report lifelong rather than subacute visual loss. However, the mitochondrial changes documented were less frequent and severe than mitochondrial abnormalities found in a similar evaluation of patients with LLON4 or in other spontaneous optic neuropathies such as nonarteritic ischemic optic neuropathy,10 31 primary open-angle glaucoma,22 and optic neuritis.32 These observations, if confirmed, provide additional perspective regarding the range of influence of mitochondrial abnormalities in the pathogenesis of spontaneous optic neuropathies and suggest a useful clinical guideline for predicting the likelihood of mitochondrial disease based on the timing of optic nerve injury.
The current nosology of congenital, nonhereditary, optic neuropathies distinguishes small optic nerves (termed ONH) from pale optic nerves (termed OA).6 This classification assumes that ONH generally arises from a prenatal perturbation of the developing visual system and receives support from the frequent association of ONH with other CNS developmental malformations.33 By contrast, OA is considered a sign of either postnatal or late intrauterine injury,6 where only a fraction of patients have small optic disks. Only four patients in this group had small optic discs, but our entire patient group had a similar distribution of visual acuity and a similar incidence of strabismus and nystagmus as reported in patients with ONH.34 The four patients with ONH did not differ from the other 17 with regard to visual function or identified mitochondrial abnormalities. No patient with ONH had a mtDNA nucleotide change predicted to be pathologic or strikingly elevated relative mtDNA content. Our patient numbers are small, but these results may imply that patients with ONH are relatively unlikely to have a mitochondrial mechanism to their optic nerve disease. In reality, ONH is often accompanied by some degree of atrophy, and the clinical significance of the distinction between ONH and congenital OA is still ambiguous.6
This study evaluated only two mitochondrial parameters (sequencing the mitochondrial genome and measuring relative mtDNA content) in a relatively small number of patients from one ethnic group, and results reported herein may not be pertinent to patients from other ethnic groups. In addition, we may have failed to detect mitochondrial abnormalities of nuclear origin or environmental derangements affecting mitochondrial function during development. Therefore, our findings require confirmation by studying these and other mitochondrial parameters in other ethnic groups before they can be more generally applied in predicting likelihood of mitochondrial disease. Nevertheless, these observations provide insight into the limited influence of mitochondrial abnormalities in the pathogenesis of sporadic, childhood-onset, bilateral optic neuropathy.
| Footnotes |
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Supported by a grant from the Prince Salman Center for Disability Research, Riyadh, Saudi Arabia, and grants from the Glaucoma Research Chair at the Department of Ophthalmology, College of Medicine, King Saud University, Riyadh, Saudi Arabia (TMB and KKA).
Submitted for publication April 20, 2008; revised May 23 and June 28, 2008; accepted October 9, 2008.
Disclosure: T.M. Bosley, None; M.C. Brodsky, None; C.M. Glasier, None; K.K. Abu-Amero, None
The publication costs of this article were defrayed in part by page charge payment. This article must therefore be marked "advertisement" in accordance with 18 U.S.C.
1734 solely to indicate this fact.
Corresponding author: Khaled K. Abu-Amero, Mitochondrial Research Laboratory, King Faisal Specialist Hospital, P. O. Box 3354, Riyadh 11211, Saudi Arabia; abuamero{at}gmail.com.
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K K Abu-Amero, B Milcarek, and T M Bosley GSTM1 and GSTT1 deletion genotypes in various spontaneous optic neuropathies in Arabs Br J Ophthalmol, August 1, 2009; 93(8): 1101 - 1104. [Abstract] [Full Text] [PDF] |
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